STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_06486RING-type domain-containing protein. (1638 aa)    
Predicted Functional Partners:
GGTG_07405
E3 ubiquitin-protein ligase UPL3.
   
 
 0.989
GGTG_11484
Serologically defined colon cancer antigen 1.
    
 
 0.968
GGTG_01718
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.820
GGTG_10281
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
   0.813
GGTG_09338
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.804
GGTG_09571
60S ribosomal protein L2.
    
   0.790
GGTG_01851
60S ribosomal protein L9-A.
   
   0.789
GGTG_10784
Nulp1-pending protein.
   
 
 0.785
GGTG_06537
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
    
   0.783
GGTG_01039
60S ribosomal protein L32.
    
   0.771
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.