STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_08560C-3 sterol dehydrogenase/C-4 decarboxylase. (411 aa)    
Predicted Functional Partners:
GGTG_05665
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.985
GGTG_08382
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
   
 0.985
GGTG_00211
3-keto-steroid reductase.
   
 0.979
GGTG_10296
Cytochrome P450 51; Belongs to the cytochrome P450 family.
   
 0.961
GGTG_08375
Squalene monooxygenase.
   
 
 0.954
GGTG_10466
Squalene synthase.
  
 
 0.952
GGTG_01710
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.944
GGTG_06095
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.943
GGTG_03440
Transmembrane domain-containing protein.
   
 
 0.934
GGTG_07319
C-8 sterol isomerase.
   
 
 0.932
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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