STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGTG_11607Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
GGTG_00106
Pre-mRNA-processing factor 17.
    
 
 0.958
GGTG_08924
DNA replication protein 4.
    
 
 0.958
GGTG_00964
U5 small nuclear ribonucleoprotein component.
    
 
 0.946
GGTG_01114
Pre-mRNA-processing-splicing factor 8.
    
   0.946
GGTG_03609
Small nuclear ribonucleoprotein G.
    
   0.946
GGTG_05029
RRM domain-containing protein.
    
   0.946
GGTG_06684
Spliceosome component.
    
   0.946
GGTG_08201
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
   0.946
GGTG_08827
Pre-mRNA-splicing factor SYF1.
    
   0.946
GGTG_09339
Sm domain-containing protein.
    
   0.946
Your Current Organism:
Gaeumannomyces tritici
NCBI taxonomy Id: 644352
Other names: G. tritici R3-111a-1, Gaeumannomyces graminis var. tritici R3-111a-1, Gaeumannomyces tritici R3-111a-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.