STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAPG_03320SNF2 family ATP-dependent chromatin-remodeling factor snf21. (1841 aa)    
Predicted Functional Partners:
MAPG_06485
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.905
MAPG_03580
DNA repair protein rhp54.
  
  
0.733
MAPG_07217
Histone H2A; Belongs to the histone H2A family.
    
 0.731
MAPG_02522
Histone H3; Belongs to the histone H3 family.
    
 0.727
MAPG_03324
Histone H3-like centromeric protein cse-4.
    
 0.727
MAPG_03032
Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
   
 0.696
MAPG_00607
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.682
MAPG_03639
Histone H2B; Belongs to the histone H2B family.
    
 0.682
MAPG_08263
Uncharacterized protein.
    
 0.677
MAPG_03114
Crossover junction endonuclease MUS81.
    
 0.670
Your Current Organism:
Magnaporthiopsis poae
NCBI taxonomy Id: 644358
Other names: M. poae ATCC 64411, Magnaporthe poae ATCC 64411, Magnaporthiopsis poae ATCC 64411
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