STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAPG_04117Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
MAPG_08136
Pre-mRNA-processing-splicing factor 8.
   
 0.965
MAPG_07709
U5 small nuclear ribonucleoprotein component.
   
 0.941
MAPG_07460
Uncharacterized protein.
   
 0.935
MAPG_00985
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.921
MAPG_05163
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.917
MAPG_02757
WD repeat-containing protein 57.
   
 0.916
MAPG_07923
Small nuclear ribonucleoprotein Sm D3.
   
 0.915
MAPG_06793
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family.
   
 0.912
MAPG_08391
Small nuclear ribonucleoprotein F.
   
 0.911
MAPG_07738
Small nuclear ribonucleoprotein Sm D2.
   
 0.909
Your Current Organism:
Magnaporthiopsis poae
NCBI taxonomy Id: 644358
Other names: M. poae ATCC 64411, Magnaporthe poae ATCC 64411, Magnaporthiopsis poae ATCC 64411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.