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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD57126.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (456 aa)    
Predicted Functional Partners:
EGD53351.1
ABC transporter-like protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.964
EGD57125.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.955
EGD55350.1
ABC transporter ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 0.943
EGD56456.1
Abc transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 0.931
EGD54168.1
Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 0.931
EGD55956.1
Hypothetical protein.
  
 0.923
EGD57123.1
Two-component system, sensor protein; COG4585 Signal transduction histidine kinase.
 
     0.825
EGD57124.1
Putative two component system response regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
   
 0.674
EGD53350.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
0.481
EGD56455.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.409
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.