STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD56368.1Regulatory protein TetR; COG1309 Transcriptional regulator. (230 aa)    
Predicted Functional Partners:
EGD56367.1
Oxidoreductase FAD/NAD(P)-binding domain-containing protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.931
EGD56366.1
COG3239 Fatty acid desaturase.
 
    0.898
EGD56369.1
COG0515 Serine/threonine protein kinase.
       0.757
EGD54995.1
Acyltransferase, WS/DGAT/MGAT; Belongs to the long-chain O-acyltransferase family.
  
     0.702
EGD56370.1
Hypothetical protein; COG2367 Beta-lactamase class A.
       0.681
EGD56364.1
Hypothetical protein.
 
     0.657
EGD55211.1
COG3239 Fatty acid desaturase.
  
  
 0.623
EGD55210.1
COG3239 Fatty acid desaturase.
  
  
 0.605
EGD53391.1
Hypothetical protein.
  
     0.581
EGD56526.1
Short chain dehydrogenase; COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes.
  
     0.578
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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