STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD56518.1Regulatory protein LuxR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (221 aa)    
Predicted Functional Partners:
EGD56517.1
PspC domain-containing protein; COG4585 Signal transduction histidine kinase.
 
 0.986
EGD56516.1
PspC domain-containing protein; COG1983 Putative stress-responsive transcriptional regulator.
 
  
 0.963
EGD56454.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 0.893
EGD53680.1
Integral membrane sensor signal transduction histidine kinase; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
 0.888
EGD56955.1
Histidine kinase dimerization and phosphoacceptor region; COG4585 Signal transduction histidine kinase.
 
 0.885
EGD56278.1
Histidine kinase; COG4585 Signal transduction histidine kinase.
 
 0.852
EGD56710.1
Histidine kinase dimerization and phosphoacceptor region; COG4585 Signal transduction histidine kinase.
 
 0.848
EGD57080.1
COG4585 Signal transduction histidine kinase.
 
 0.841
EGD53470.1
COG4585 Signal transduction histidine kinase.
 
 0.831
EGD56839.1
Histidine kinase dimerization and phosphoacceptor region; COG4585 Signal transduction histidine kinase.
 
 0.754
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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