Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD54450.1 | EGD54957.1 | SCNU_14249 | SCNU_10516 | COG1169 Isochorismate synthase. | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | 0.907 |
EGD54450.1 | EGD56677.1 | SCNU_14249 | SCNU_03962 | COG1169 Isochorismate synthase. | COG0169 Shikimate 5-dehydrogenase. | 0.846 |
EGD54450.1 | aroA | SCNU_14249 | SCNU_10084 | COG1169 Isochorismate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.536 |
EGD54450.1 | aroB | SCNU_14249 | SCNU_04361 | COG1169 Isochorismate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.599 |
EGD54450.1 | aroC | SCNU_14249 | SCNU_04351 | COG1169 Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.930 |
EGD54450.1 | aroE | SCNU_14249 | SCNU_04341 | COG1169 Isochorismate synthase. | COG0169 Shikimate 5-dehydrogenase. | 0.887 |
EGD54450.1 | aroQ | SCNU_14249 | SCNU_15189 | COG1169 Isochorismate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.839 |
EGD54957.1 | EGD54450.1 | SCNU_10516 | SCNU_14249 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | COG1169 Isochorismate synthase. | 0.907 |
EGD54957.1 | EGD56677.1 | SCNU_10516 | SCNU_03962 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | COG0169 Shikimate 5-dehydrogenase. | 0.800 |
EGD54957.1 | aroB | SCNU_10516 | SCNU_04361 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.605 |
EGD54957.1 | aroC | SCNU_10516 | SCNU_04351 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.947 |
EGD54957.1 | aroE | SCNU_10516 | SCNU_04341 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | COG0169 Shikimate 5-dehydrogenase. | 0.916 |
EGD54957.1 | aroK | SCNU_10516 | SCNU_04356 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.514 |
EGD54957.1 | aroQ | SCNU_10516 | SCNU_15189 | Salicylate synthase MbtI; COG0147 Anthranilate/para-aminobenzoate synthases component I. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.836 |
EGD56059.1 | aroB | SCNU_04346 | SCNU_04361 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.739 |
EGD56059.1 | aroC | SCNU_04346 | SCNU_04351 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.759 |
EGD56059.1 | aroE | SCNU_04346 | SCNU_04341 | Hypothetical protein. | COG0169 Shikimate 5-dehydrogenase. | 0.856 |
EGD56059.1 | aroK | SCNU_04346 | SCNU_04356 | Hypothetical protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.776 |
EGD56059.1 | mltG | SCNU_04346 | SCNU_04336 | Hypothetical protein. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.788 |
EGD56677.1 | EGD54450.1 | SCNU_03962 | SCNU_14249 | COG0169 Shikimate 5-dehydrogenase. | COG1169 Isochorismate synthase. | 0.846 |
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