STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD56245.1COG1960 Acyl-CoA dehydrogenases. (368 aa)    
Predicted Functional Partners:
EGD56246.1
COG1960 Acyl-CoA dehydrogenases.
     0.971
EGD55424.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.961
EGD56940.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.744
EGD56939.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.740
EGD53897.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.739
EGD54845.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.720
EGD53829.1
COG1960 Acyl-CoA dehydrogenases.
     0.682
EGD53983.1
COG1960 Acyl-CoA dehydrogenases.
 
     0.593
EGD55574.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.560
EGD54951.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.549
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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