STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD56247.1Putative iron permease FTR1; COG0672 High-affinity Fe2+/Pb2+ permease. (665 aa)    
Predicted Functional Partners:
EGD56248.1
Hypothetical protein; COG2837 Predicted iron-dependent peroxidase.
 
  
 0.991
EGD56353.1
Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.986
EGD53298.1
Peroxidase; COG2837 Predicted iron-dependent peroxidase.
 
  
 0.980
EGD54899.1
Dyp-type peroxidase family protein; COG2837 Predicted iron-dependent peroxidase.
  
  
 0.947
EGD56354.1
Peptidase M75, Imelysin; COG2822 Predicted periplasmic lipoprotein involved in iron transport.
 
  
 0.936
EGD56355.1
Iron permease FTR1; COG0672 High-affinity Fe2+/Pb2+ permease.
 
 
0.848
EGD56164.1
2-aminoethylphosphonate ABC transporter substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
    0.788
EGD56165.1
Hypothetical protein.
  
    0.787
EGD54958.1
AMP-dependent synthetase and ligase; COG1021 Peptide arylation enzymes.
   
    0.655
EGD56398.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.622
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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