STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD56298.1COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (289 aa)    
Predicted Functional Partners:
EGD56297.1
Putative oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
       0.875
EGD56299.1
Monooxygenase; COG2072 Predicted flavoprotein involved in K+ transport.
 
 
  0.846
EGD53204.1
Fatty acid synthase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
    
 0.842
EGD56296.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    
  0.837
EGD57059.1
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
 
  
 0.779
EGD54951.1
COG3321 Polyketide synthase modules and related proteins.
  
 
 0.691
EGD53570.1
Oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.680
EGD54662.1
COG0777 Acetyl-CoA carboxylase beta subunit.
    
  0.650
EGD56597.1
Flavin-containing monooxygenase FMO; COG2072 Predicted flavoprotein involved in K+ transport.
  
 
 0.633
EGD55455.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
  
  0.579
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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