STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD55828.1NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (328 aa)    
Predicted Functional Partners:
EGD55829.1
Hypothetical protein.
  
  
 0.883
EGD55830.1
Glycosyl transferase, group 1 family protein; COG0438 Glycosyltransferase.
  
  
 0.879
EGD55827.1
NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
0.822
EGD54548.1
Cell wall hydrolase/autolysin; COG3409 Putative peptidoglycan-binding domain-containing protein.
 
  
 0.794
EGD56862.1
Hypothetical protein.
  
  
 0.753
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.699
EGD55284.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.662
EGD53220.1
Hypothetical protein; COG3023 Negative regulator of beta-lactamase expression.
  
  
 0.582
EGD54094.1
COG0627 Predicted esterase.
  
  
 0.499
kgd
Alpha-ketoglutarate decarboxylase; COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
      
 0.489
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.