Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD53973.1 | EGD54042.1 | SCNU_15919 | SCNU_16264 | Hypothetical protein. | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | 0.732 |
EGD53973.1 | EGD55358.1 | SCNU_15919 | SCNU_08871 | Hypothetical protein. | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | 0.735 |
EGD53973.1 | EGD55754.1 | SCNU_15919 | SCNU_05920 | Hypothetical protein. | Hypothetical protein. | 0.747 |
EGD53973.1 | EGD55868.1 | SCNU_15919 | SCNU_06490 | Hypothetical protein. | Hypothetical protein; COG0762 Predicted integral membrane protein. | 0.738 |
EGD53973.1 | EGD57016.1 | SCNU_15919 | SCNU_01520 | Hypothetical protein. | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.751 |
EGD53973.1 | rbpA | SCNU_15919 | SCNU_05176 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.774 |
EGD54042.1 | EGD53973.1 | SCNU_16264 | SCNU_15919 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.732 |
EGD54042.1 | EGD55358.1 | SCNU_16264 | SCNU_08871 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | 0.544 |
EGD54042.1 | EGD55754.1 | SCNU_16264 | SCNU_05920 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.551 |
EGD54042.1 | EGD55868.1 | SCNU_16264 | SCNU_06490 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein; COG0762 Predicted integral membrane protein. | 0.719 |
EGD54042.1 | EGD57016.1 | SCNU_16264 | SCNU_01520 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.650 |
EGD54042.1 | rbpA | SCNU_16264 | SCNU_05176 | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.727 |
EGD55358.1 | EGD53973.1 | SCNU_08871 | SCNU_15919 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Hypothetical protein. | 0.735 |
EGD55358.1 | EGD54042.1 | SCNU_08871 | SCNU_16264 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | 0.544 |
EGD55358.1 | EGD55754.1 | SCNU_08871 | SCNU_05920 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Hypothetical protein. | 0.659 |
EGD55358.1 | EGD55868.1 | SCNU_08871 | SCNU_06490 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Hypothetical protein; COG0762 Predicted integral membrane protein. | 0.705 |
EGD55358.1 | EGD57016.1 | SCNU_08871 | SCNU_01520 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.667 |
EGD55358.1 | rbpA | SCNU_08871 | SCNU_05176 | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.714 |
EGD55754.1 | EGD53973.1 | SCNU_05920 | SCNU_15919 | Hypothetical protein. | Hypothetical protein. | 0.747 |
EGD55754.1 | EGD54042.1 | SCNU_05920 | SCNU_16264 | Hypothetical protein. | Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. | 0.551 |
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