STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD55300.1Virulence factor Mce family protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (415 aa)    
Predicted Functional Partners:
EGD55305.1
ABC transporter-like protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.985
EGD55299.1
Virulence factor Mce family protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
 0.979
EGD55303.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.953
EGD55304.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.953
EGD55301.1
Virulence factor Mce family protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.938
EGD55298.1
Virulence factor Mce family protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
0.935
EGD55302.1
Virulence factor Mce family protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 
 0.922
EGD55420.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.921
EGD55419.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.902
EGD54775.1
Hypothetical protein; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.901
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.