STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD55360.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
EGD56856.1
Hypothetical protein.
   
 0.826
EGD54193.1
Hypothetical protein.
   
 0.826
EGD55355.1
COG1333 ResB protein required for cytochrome c biosynthesis.
       0.760
EGD55354.1
COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component.
       0.696
EGD55361.1
Hypothetical protein.
       0.655
EGD55362.1
Hypothetical protein.
       0.655
EGD53211.1
TP901 family phage tail tape measure protein, putative; COG5412 Phage-related protein.
   
 
 0.650
EGD55356.1
Cytochrome c-type biosynthesis protein CCDA; COG0785 Cytochrome c biogenesis protein.
       0.626
hemL
COG0001 Glutamate-1-semialdehyde aminotransferase.
       0.566
EGD55358.1
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
       0.565
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.