STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD55027.1COG1511 Predicted membrane protein. (627 aa)    
Predicted Functional Partners:
EGD55028.1
Hypothetical protein.
 
 
 0.972
EGD54907.1
Hypothetical protein; COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
     0.777
EGD55025.1
Hypothetical protein.
 
     0.692
EGD55026.1
COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family.
  
    0.647
EGD54628.1
COG0067 Glutamate synthase domain 1.
  
    0.541
EGD56191.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.536
EGD56838.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.488
EGD57117.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.488
EGD57125.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.488
EGD56116.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.488
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.