Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD53427.1 | EGD55107.1 | SCNU_19155 | SCNU_11276 | Mfs transporter; COG0477 Permeases of the major facilitator superfamily. | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | 0.767 |
EGD53427.1 | EGD56577.1 | SCNU_19155 | SCNU_03462 | Mfs transporter; COG0477 Permeases of the major facilitator superfamily. | Multidrug ABC transporter; COG0477 Permeases of the major facilitator superfamily. | 0.687 |
EGD54929.1 | EGD55107.1 | SCNU_12000 | SCNU_11276 | COG0477 Permeases of the major facilitator superfamily. | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | 0.747 |
EGD55106.1 | EGD55107.1 | SCNU_11271 | SCNU_11276 | Helix-turn-helix type 11 domain-containing protein; COG2378 Predicted transcriptional regulator. | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | 0.605 |
EGD55107.1 | EGD53427.1 | SCNU_11276 | SCNU_19155 | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | Mfs transporter; COG0477 Permeases of the major facilitator superfamily. | 0.767 |
EGD55107.1 | EGD54929.1 | SCNU_11276 | SCNU_12000 | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | COG0477 Permeases of the major facilitator superfamily. | 0.747 |
EGD55107.1 | EGD55106.1 | SCNU_11276 | SCNU_11271 | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | Helix-turn-helix type 11 domain-containing protein; COG2378 Predicted transcriptional regulator. | 0.605 |
EGD55107.1 | EGD56577.1 | SCNU_11276 | SCNU_03462 | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | Multidrug ABC transporter; COG0477 Permeases of the major facilitator superfamily. | 0.688 |
EGD56577.1 | EGD53427.1 | SCNU_03462 | SCNU_19155 | Multidrug ABC transporter; COG0477 Permeases of the major facilitator superfamily. | Mfs transporter; COG0477 Permeases of the major facilitator superfamily. | 0.687 |
EGD56577.1 | EGD55107.1 | SCNU_03462 | SCNU_11276 | Multidrug ABC transporter; COG0477 Permeases of the major facilitator superfamily. | Transmembrane efflux protein; COG0477 Permeases of the major facilitator superfamily. | 0.688 |