STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54692.1COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain. (662 aa)    
Predicted Functional Partners:
EGD54691.1
COG1239 Mg-chelatase subunit ChlI.
 
    0.976
EGD54695.1
Hypothetical protein.
       0.841
EGD54694.1
Uracil-DNA glycosylase superfamily protein; COG3663 G:T/U mismatch-specific DNA glycosylase.
       0.797
EGD54693.1
Endonuclease/exonuclease/phosphatase.
       0.778
EGD56799.1
Nucleosidase; COG0775 Nucleoside phosphorylase.
    
   0.762
EGD54690.1
Hypothetical protein; COG0554 Glycerol kinase.
 
     0.678
EGD56180.1
Hypothetical protein.
 
     0.547
EGD56178.1
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
 
     0.437
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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