Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD53280.1 | EGD53496.1 | SCNU_19822 | SCNU_18752 | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.522 |
EGD53280.1 | EGD54566.1 | SCNU_19822 | SCNU_13328 | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | 0.498 |
EGD53280.1 | EGD56016.1 | SCNU_19822 | SCNU_07240 | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.618 |
EGD53496.1 | EGD53280.1 | SCNU_18752 | SCNU_19822 | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.522 |
EGD53496.1 | EGD54066.1 | SCNU_18752 | SCNU_16384 | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.504 |
EGD53496.1 | EGD54566.1 | SCNU_18752 | SCNU_13328 | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | 0.640 |
EGD54066.1 | EGD53496.1 | SCNU_16384 | SCNU_18752 | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.504 |
EGD54066.1 | EGD54566.1 | SCNU_16384 | SCNU_13328 | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | 0.498 |
EGD54066.1 | EGD56016.1 | SCNU_16384 | SCNU_07240 | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.626 |
EGD54358.1 | EGD54566.1 | SCNU_13779 | SCNU_13328 | Putative esterase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | 0.786 |
EGD54566.1 | EGD53280.1 | SCNU_13328 | SCNU_19822 | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.498 |
EGD54566.1 | EGD53496.1 | SCNU_13328 | SCNU_18752 | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | PHB de-polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.640 |
EGD54566.1 | EGD54066.1 | SCNU_13328 | SCNU_16384 | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.498 |
EGD54566.1 | EGD54358.1 | SCNU_13328 | SCNU_13779 | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | Putative esterase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | 0.786 |
EGD54566.1 | EGD56016.1 | SCNU_13328 | SCNU_07240 | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.567 |
EGD56016.1 | EGD53280.1 | SCNU_07240 | SCNU_19822 | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | Poly-beta-hydroxybutyrate polymerase domain-containing protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.618 |
EGD56016.1 | EGD54066.1 | SCNU_07240 | SCNU_16384 | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | Poly-beta-hydroxybutyrate polymerase domain protein; COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.626 |
EGD56016.1 | EGD54566.1 | SCNU_07240 | SCNU_13328 | acyl-CoA synthetase; COG3243 Poly(3-hydroxyalkanoate) synthetase. | PHB depolymerase family esterase; COG3509 Poly(3-hydroxybutyrate) depolymerase. | 0.567 |