STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54582.1COG0515 Serine/threonine protein kinase. (635 aa)    
Predicted Functional Partners:
EGD56032.1
Hypothetical protein.
   
 
 0.999
EGD56191.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.999
EGD54586.1
COG0631 Serine/threonine protein phosphatase.
 0.999
EGD54587.1
Forkhead-associated protein; COG1716 FOG: FHA domain.
 
 
 
 0.999
EGD54588.1
Forkhead-associated protein; COG1716 FOG: FHA domain.
 
 
 
 0.999
EGD53555.1
Forkhead-associated protein; COG1716 FOG: FHA domain.
 
 
 
 0.999
EGD56031.1
COG0631 Serine/threonine protein phosphatase.
 
 0.995
EGD54583.1
COG0515 Serine/threonine protein kinase.
 
 
0.982
EGD54584.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
    
 0.975
EGD54585.1
Cell cycle protein; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.975
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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