STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54601.1COG1085 Galactose-1-phosphate uridylyltransferase. (374 aa)    
Predicted Functional Partners:
EGD54600.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.999
EGD55040.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.991
EGD55039.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
 
 0.895
EGD54599.1
Hypothetical protein.
 
     0.836
EGD54100.1
COG0562 UDP-galactopyranose mutase.
 
  
 0.828
EGD55373.1
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
   
 
 0.801
EGD56723.1
COG0033 Phosphoglucomutase.
     
 0.599
pheT
phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.588
EGD54602.1
COG0477 Permeases of the major facilitator superfamily.
       0.584
EGD54603.1
Regulatory protein TetR; COG3226 Uncharacterized protein conserved in bacteria.
       0.584
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.