Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGD54477.1 | EGD54478.1 | SCNU_14384 | SCNU_14389 | PPOX class putative F420-dependent enzyme. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.686 |
| EGD54477.1 | EGD54479.1 | SCNU_14384 | SCNU_14394 | PPOX class putative F420-dependent enzyme. | COG2205 Osmosensitive K+ channel histidine kinase. | 0.686 |
| EGD54477.1 | EGD54480.1 | SCNU_14384 | SCNU_14399 | PPOX class putative F420-dependent enzyme. | Potassium-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | 0.589 |
| EGD54477.1 | EGD54483.1 | SCNU_14384 | SCNU_14414 | PPOX class putative F420-dependent enzyme. | Hypothetical protein. | 0.519 |
| EGD54477.1 | EGD54484.1 | SCNU_14384 | SCNU_14419 | PPOX class putative F420-dependent enzyme. | Hypothetical protein. | 0.519 |
| EGD54477.1 | kdpA | SCNU_14384 | SCNU_14409 | PPOX class putative F420-dependent enzyme. | Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.589 |
| EGD54477.1 | kdpB | SCNU_14384 | SCNU_14404 | PPOX class putative F420-dependent enzyme. | K+-transporting ATPase subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. | 0.589 |
| EGD54478.1 | EGD54477.1 | SCNU_14389 | SCNU_14384 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | PPOX class putative F420-dependent enzyme. | 0.686 |
| EGD54478.1 | EGD54479.1 | SCNU_14389 | SCNU_14394 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG2205 Osmosensitive K+ channel histidine kinase. | 0.999 |
| EGD54478.1 | EGD54480.1 | SCNU_14389 | SCNU_14399 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Potassium-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | 0.940 |
| EGD54478.1 | EGD54483.1 | SCNU_14389 | SCNU_14414 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Hypothetical protein. | 0.615 |
| EGD54478.1 | EGD54484.1 | SCNU_14389 | SCNU_14419 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Hypothetical protein. | 0.615 |
| EGD54478.1 | EGD54705.1 | SCNU_14389 | SCNU_12472 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | ATP-binding region ATPase domain-containing protein; COG0642 Signal transduction histidine kinase. | 0.924 |
| EGD54478.1 | kdpA | SCNU_14389 | SCNU_14409 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.920 |
| EGD54478.1 | kdpB | SCNU_14389 | SCNU_14404 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | K+-transporting ATPase subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily. | 0.921 |
| EGD54479.1 | EGD54477.1 | SCNU_14394 | SCNU_14384 | COG2205 Osmosensitive K+ channel histidine kinase. | PPOX class putative F420-dependent enzyme. | 0.686 |
| EGD54479.1 | EGD54478.1 | SCNU_14394 | SCNU_14389 | COG2205 Osmosensitive K+ channel histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.999 |
| EGD54479.1 | EGD54480.1 | SCNU_14394 | SCNU_14399 | COG2205 Osmosensitive K+ channel histidine kinase. | Potassium-transporting ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex. | 0.993 |
| EGD54479.1 | EGD54483.1 | SCNU_14394 | SCNU_14414 | COG2205 Osmosensitive K+ channel histidine kinase. | Hypothetical protein. | 0.615 |
| EGD54479.1 | EGD54484.1 | SCNU_14394 | SCNU_14419 | COG2205 Osmosensitive K+ channel histidine kinase. | Hypothetical protein. | 0.615 |
page 1 of 4