STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54192.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
EGD57160.1
Hypothetical protein; COG0433 Predicted ATPase.
   
 
 0.726
EGD55632.1
Hypothetical protein.
  
     0.691
EGD53943.1
Hypothetical protein.
  
     0.685
EGD57094.1
Hypothetical protein.
  
     0.663
EGD55030.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
     0.434
EGD54571.1
Hypothetical protein.
  
     0.409
EGD54678.1
Phosphotransferase system cellobiose-specific component IIC.
  
     0.402
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.