STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54271.1Dehydrogenase/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (314 aa)    
Predicted Functional Partners:
EGD53204.1
Fatty acid synthase; COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 0.982
EGD54270.1
Polyketide cyclase/dehydrase.
 
     0.915
EGD54089.1
COG3321 Polyketide synthase modules and related proteins.
  
 0.795
EGD53374.1
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.704
EGD53375.1
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.704
EGD53199.1
Amino acid adenylation domain-containing protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.704
EGD54628.1
COG0067 Glutamate synthase domain 1.
     
 0.687
EGD56391.1
PTS system, N-acetylglucosamine-specific IIBC subunit; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
     
 0.684
EGD56250.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.638
EGD54272.1
Hypothetical protein.
 
    0.587
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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