STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54175.1COG0747 ABC-type dipeptide transport system, periplasmic component. (528 aa)    
Predicted Functional Partners:
EGD54177.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.991
EGD54176.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.990
EGD54178.1
ABC peptide transporter, ATP-binding component; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.986
EGD54184.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
EGD54185.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.959
EGD54183.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG4608 ABC-type oligopeptide transport system, ATPase component.
 
 
 0.936
EGD54186.1
Extracellular solute-binding protein family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.549
EGD54174.1
COG3119 Arylsulfatase A and related enzymes.
       0.533
EGD53743.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter membrane protein, PAAT family; amino acid ABC transporter substrate-binding protein, PAAT family.
   
 
 0.417
EGD54153.1
ABC transporter-like protein; COG1122 ABC-type cobalt transport system, ATPase component.
 
 
 0.412
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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