STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD54040.1COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase. (396 aa)    
Predicted Functional Partners:
EGD56493.1
COG2124 Cytochrome P450.
  
 0.883
EGD56534.1
COG2124 Cytochrome P450.
  
 0.883
EGD55446.1
COG2124 Cytochrome P450.
  
 0.883
EGD54295.1
COG2124 Cytochrome P450.
  
 0.883
EGD54297.1
COG2124 Cytochrome P450.
  
 0.883
EGD53592.1
COG2124 Cytochrome P450.
  
 0.883
EGD53240.1
COG2124 Cytochrome P450.
  
 0.883
EGD53242.1
COG2124 Cytochrome P450.
  
 0.883
EGD54039.1
Hypothetical protein.
       0.875
EGD54041.1
PspA/IM30 family protein; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
       0.837
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.