Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD53869.1 | EGD53870.1 | SCNU_16448 | SCNU_16453 | Folate-binding protein YgfZ; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family. | Hypothetical protein. | 0.739 |
EGD53869.1 | EGD54401.1 | SCNU_16448 | SCNU_13994 | Folate-binding protein YgfZ; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family. | MOSC domain containing protein; COG2258 Uncharacterized protein conserved in bacteria. | 0.538 |
EGD53870.1 | EGD53869.1 | SCNU_16453 | SCNU_16448 | Hypothetical protein. | Folate-binding protein YgfZ; COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family. | 0.739 |
EGD53870.1 | EGD53873.1 | SCNU_16453 | SCNU_16468 | Hypothetical protein. | Hypothetical protein. | 0.500 |
EGD53870.1 | EGD53970.1 | SCNU_16453 | SCNU_15904 | Hypothetical protein. | Hypothetical protein. | 0.434 |
EGD53870.1 | EGD53973.1 | SCNU_16453 | SCNU_15919 | Hypothetical protein. | Hypothetical protein. | 0.407 |
EGD53870.1 | EGD54401.1 | SCNU_16453 | SCNU_13994 | Hypothetical protein. | MOSC domain containing protein; COG2258 Uncharacterized protein conserved in bacteria. | 0.538 |
EGD53870.1 | EGD55358.1 | SCNU_16453 | SCNU_08871 | Hypothetical protein. | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | 0.478 |
EGD53870.1 | rbpA | SCNU_16453 | SCNU_05176 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.413 |
EGD53873.1 | EGD53870.1 | SCNU_16468 | SCNU_16453 | Hypothetical protein. | Hypothetical protein. | 0.500 |
EGD53873.1 | EGD53970.1 | SCNU_16468 | SCNU_15904 | Hypothetical protein. | Hypothetical protein. | 0.635 |
EGD53873.1 | EGD53973.1 | SCNU_16468 | SCNU_15919 | Hypothetical protein. | Hypothetical protein. | 0.696 |
EGD53873.1 | EGD55358.1 | SCNU_16468 | SCNU_08871 | Hypothetical protein. | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | 0.655 |
EGD53873.1 | rbpA | SCNU_16468 | SCNU_05176 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.739 |
EGD53970.1 | EGD53870.1 | SCNU_15904 | SCNU_16453 | Hypothetical protein. | Hypothetical protein. | 0.434 |
EGD53970.1 | EGD53873.1 | SCNU_15904 | SCNU_16468 | Hypothetical protein. | Hypothetical protein. | 0.635 |
EGD53970.1 | EGD53973.1 | SCNU_15904 | SCNU_15919 | Hypothetical protein. | Hypothetical protein. | 0.666 |
EGD53970.1 | EGD55358.1 | SCNU_15904 | SCNU_08871 | Hypothetical protein. | Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase. | 0.586 |
EGD53970.1 | rbpA | SCNU_15904 | SCNU_05176 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.725 |
EGD53973.1 | EGD53870.1 | SCNU_15919 | SCNU_16453 | Hypothetical protein. | Hypothetical protein. | 0.407 |
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