Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGD53921.1 | EGD53922.1 | SCNU_16708 | SCNU_16713 | Integral membrane protein. | Regulatory protein MarR; COG1846 Transcriptional regulators. | 0.633 |
EGD53921.1 | EGD53997.1 | SCNU_16708 | SCNU_16039 | Integral membrane protein. | Hypothetical protein. | 0.729 |
EGD53921.1 | EGD54593.1 | SCNU_16708 | SCNU_13463 | Integral membrane protein. | Hypothetical protein. | 0.636 |
EGD53921.1 | EGD55226.1 | SCNU_16708 | SCNU_10149 | Integral membrane protein. | Anti-sigma factor. | 0.855 |
EGD53921.1 | EGD56461.1 | SCNU_16708 | SCNU_02872 | Integral membrane protein. | Hypothetical protein. | 0.585 |
EGD53921.1 | EGD56644.1 | SCNU_16708 | SCNU_03797 | Integral membrane protein. | Hypothetical protein. | 0.848 |
EGD53921.1 | rpoA | SCNU_16708 | SCNU_09859 | Integral membrane protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.756 |
EGD53921.1 | rpoB | SCNU_16708 | SCNU_08546 | Integral membrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.791 |
EGD53921.1 | rpoC | SCNU_16708 | SCNU_08541 | Integral membrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.798 |
EGD53921.1 | rpoZ | SCNU_16708 | SCNU_04436 | Integral membrane protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.755 |
EGD53922.1 | EGD53921.1 | SCNU_16713 | SCNU_16708 | Regulatory protein MarR; COG1846 Transcriptional regulators. | Integral membrane protein. | 0.633 |
EGD53997.1 | EGD53921.1 | SCNU_16039 | SCNU_16708 | Hypothetical protein. | Integral membrane protein. | 0.729 |
EGD53997.1 | EGD55226.1 | SCNU_16039 | SCNU_10149 | Hypothetical protein. | Anti-sigma factor. | 0.516 |
EGD53997.1 | EGD56461.1 | SCNU_16039 | SCNU_02872 | Hypothetical protein. | Hypothetical protein. | 0.765 |
EGD53997.1 | EGD56644.1 | SCNU_16039 | SCNU_03797 | Hypothetical protein. | Hypothetical protein. | 0.702 |
EGD54593.1 | EGD53921.1 | SCNU_13463 | SCNU_16708 | Hypothetical protein. | Integral membrane protein. | 0.636 |
EGD55226.1 | EGD53921.1 | SCNU_10149 | SCNU_16708 | Anti-sigma factor. | Integral membrane protein. | 0.855 |
EGD55226.1 | EGD53997.1 | SCNU_10149 | SCNU_16039 | Anti-sigma factor. | Hypothetical protein. | 0.516 |
EGD56461.1 | EGD53921.1 | SCNU_02872 | SCNU_16708 | Hypothetical protein. | Integral membrane protein. | 0.585 |
EGD56461.1 | EGD53997.1 | SCNU_02872 | SCNU_16039 | Hypothetical protein. | Hypothetical protein. | 0.765 |
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