STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD53935.1Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (342 aa)    
Predicted Functional Partners:
EGD53934.1
Hypothetical protein.
 
 0.998
EGD53933.1
Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
 
 0.989
EGD53573.1
Hypothetical protein.
 
 0.988
EGD53936.1
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.965
EGD55442.1
COG0183 Acetyl-CoA acetyltransferase.
 
 0.959
EGD53572.1
Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
 
 0.952
EGD55441.1
Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
 
 0.933
EGD53937.1
COG1960 Acyl-CoA dehydrogenases.
 
  
  0.926
EGD55447.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.875
EGD53569.1
COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.856
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.