STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD53392.1DSBA oxidoreductase; COG1651 Protein-disulfide isomerase. (218 aa)    
Predicted Functional Partners:
EGD53394.1
Vitamin K epoxide reductase; COG4243 Predicted membrane protein.
 
  
 0.752
EGD53391.1
Hypothetical protein.
       0.663
EGD53393.1
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
 
    
0.588
EGD55814.1
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.546
EGD55817.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.516
EGD55118.1
Regulatory protein LuxR; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.443
EGD54210.1
Hypothetical protein.
  
     0.413
EGD53390.1
Hypothetical protein.
       0.409
EGD55357.1
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.408
Your Current Organism:
Gordonia neofelifaecis
NCBI taxonomy Id: 644548
Other names: G. neofelifaecis NRRL B-59395, Gordonia neofelifaecis AD-6, Gordonia neofelifaecis NRRL B-59395, Gordonia neofelifaecis str. NRRL B-59395, Gordonia neofelifaecis strain NRRL B-59395, Gordonia sp. AD-6
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