Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| sqdB | sync_0052 | sync_0053 | sync_0052 | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | 0.928 |
| sqdB | sync_0054 | sync_0053 | sync_0054 | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | Possible high light inducible protein. | 0.598 |
| sqdB | thiG | sync_0053 | sync_0055 | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.435 |
| sync_0052 | sqdB | sync_0052 | sync_0053 | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | 0.928 |
| sync_0052 | sync_0054 | sync_0052 | sync_0054 | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | Possible high light inducible protein. | 0.583 |
| sync_0052 | thiG | sync_0052 | sync_0055 | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.426 |
| sync_0054 | sqdB | sync_0054 | sync_0053 | Possible high light inducible protein. | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | 0.598 |
| sync_0054 | sync_0052 | sync_0054 | sync_0052 | Possible high light inducible protein. | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | 0.583 |
| sync_0054 | thiG | sync_0054 | sync_0055 | Possible high light inducible protein. | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.490 |
| thiG | sqdB | sync_0055 | sync_0053 | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Sulfolipid biosynthesis protein SqdB; Identified by match to protein family HMM PF01370. | 0.435 |
| thiG | sync_0052 | sync_0055 | sync_0052 | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. | 0.426 |
| thiG | sync_0054 | sync_0055 | sync_0054 | Thiamin biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Possible high light inducible protein. | 0.490 |