Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sync_0057Putative photosystem I assembly related protein Ycf37; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. (191 aa)    
Predicted Functional Partners:
sync_0241
Rubredoxin; Identified by match to protein family HMM PF00301.
  
   
 0.779
sync_1331
Conserved hypothetical protein; Identified by similarity to GB:CAE20920.1.
  
     0.770
sync_1274
Uncharacterized protein.
  
     0.769
sync_2096
Conserved hypothetical protein.
  
     0.761
sync_1039
PsbP; Identified by match to protein family HMM PF01789.
  
     0.759
sync_1271
Cyanobacteria-specific chaperone containing dnaj domain fused to a membrane domain.
  
     0.759
sync_2455
PRC-barrel domain protein; Identified by match to protein family HMM PF05239.
  
     0.757
sync_2117
Conserved hypothetical protein; Identified by similarity to GB:CAE21526.1.
  
     0.752
sync_1366
Conserved hypothetical protein.
  
     0.745
sync_1911
Conserved hypothetical protein.
  
     0.745
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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