sync_0088 protein (Synechococcus sp. CC9311)

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Score

sync_0088

Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392. (329 aa)

Predicted Functional Partners:

sync_2544

0.700

sync_0892

0.678

sync_1143

0.664

sync_1559

0.632

sync_2026

0.621

cysE

0.610

sync_1720

0.605

sync_2198

0.603

rpoZ

0.572

sync_0089

0.566

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cysE	sync_0088	sync_0087	sync_0088	Serine O-acetyltransferase; Identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172.	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	0.610
cysE	sync_0089	sync_0087	sync_0089	Serine O-acetyltransferase; Identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172.	Dienelactone hydrolase; Identified by match to protein family HMM PF01738.	0.407
rpoZ	sync_0088	sync_2269	sync_0088	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	0.572
rpoZ	sync_0892	sync_2269	sync_0892	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.755
rpoZ	sync_1143	sync_2269	sync_1143	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE07418.1.	0.618
rpoZ	sync_1559	sync_2269	sync_1559	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00075.1.	0.631
rpoZ	sync_1720	sync_2269	sync_1720	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein.	0.618
rpoZ	sync_2026	sync_2269	sync_2026	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Single-stranded DNA-binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.636
rpoZ	sync_2198	sync_2269	sync_2198	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.612
rpoZ	sync_2544	sync_2269	sync_2544	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.767
sync_0088	cysE	sync_0088	sync_0087	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Serine O-acetyltransferase; Identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172.	0.610
sync_0088	rpoZ	sync_0088	sync_2269	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.572
sync_0088	sync_0089	sync_0088	sync_0089	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Dienelactone hydrolase; Identified by match to protein family HMM PF01738.	0.566
sync_0088	sync_0892	sync_0088	sync_0892	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.678
sync_0088	sync_1143	sync_0088	sync_1143	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Conserved hypothetical protein; Identified by similarity to GB:CAE07418.1.	0.664
sync_0088	sync_1559	sync_0088	sync_1559	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00075.1.	0.632
sync_0088	sync_1720	sync_0088	sync_1720	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Conserved hypothetical protein.	0.605
sync_0088	sync_2026	sync_0088	sync_2026	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Single-stranded DNA-binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.621
sync_0088	sync_2198	sync_0088	sync_2198	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Uncharacterized protein.	0.603
sync_0088	sync_2544	sync_0088	sync_2544	Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.700