STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0096Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family. (159 aa)    
Predicted Functional Partners:
sync_1931
Glutathione reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
  
 0.922
gshB
Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
     
 0.922
sync_1035
Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798; match to protein family HMM PF06108.
   
 
 0.906
sync_1161
Glutathione S-transferase; Identified by match to protein family HMM PF02798.
   
 
 0.906
sync_1172
Glutathione S-transferase gst; Identified by match to protein family HMM PF02798.
   
 
 0.906
sync_1820
Conserved hypothetical protein.
   
 
 0.906
sync_2560
Glutathione S-transferase zeta class.
   
 
 0.906
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 
 0.613
mgtE
Magnesium transporter; Acts as a magnesium transporter.
       0.572
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
  
  
 0.512
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (32%) [HD]