STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0122Serine/threonine protein kinase; Identified by match to protein family HMM PF00069. (692 aa)    
Predicted Functional Partners:
sync_1562
Identified by match to protein family HMM PF00498; match to protein family HMM PF00905; match to protein family HMM PF00912.
   
 
 0.900
sync_0121
Domain of unknown function (DUF323) family protein; Identified by match to protein family HMM PF03781.
  
  
 0.710
sync_0573
Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
 
 0.660
sync_1332
Conserved hypothetical protein.
  
     0.584
sync_1363
Conserved hypothetical protein; Identified by similarity to GB:CAE20896.1.
  
 
 0.583
sync_1043
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.548
sync_2139
Conserved hypothetical protein.
  
     0.546
sync_0118
Conserved hypothetical protein.
 
     0.542
sync_1040
Conserved hypothetical protein.
  
    0.538
sync_2059
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the OprB family.
  
     0.504
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.