STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0141Glycosyl transferase family 11. (274 aa)    
Predicted Functional Partners:
sync_0140
Hypothetical protein; Identified by Glimmer2; putative.
       0.737
sync_1194
Possible oxidoreductase; Identified by match to protein family HMM PF01565.
  
     0.675
sync_2232
Conserved hypothetical protein; Identified by similarity to GB:CAE07060.1.
  
     0.524
sync_0765
DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
     0.507
sync_2124
AbrB family transciptional regulator.
  
     0.489
sync_0937
Conserved hypothetical protein.
  
     0.485
sync_2507
Possible 4'-phosphopantetheinyl transferase family protein; Identified by match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
  
     0.482
sync_1860
Membrane associated GTPase.
  
     0.464
sync_0142
Membrane protein, putative.
       0.462
sync_0143
Hypothetical protein; Identified by Glimmer2; putative.
       0.462
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.