gmd protein (Synechococcus sp. CC9311) - STRING interaction network

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gmd

GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (384 aa)

Predicted Functional Partners:

wcaG-2

0.999

sync_0160

0.959

cugP

0.926

sync_0147

0.874

sync_0192

0.761

sync_0148

0.697

rplD

0.691

sync_0150

0.655

trx-1

0.646

sync_0183

0.467

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cugP	gmd	sync_2617	sync_0146	Nucleotidyl transferase family protein; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	0.926
cugP	sync_0150	sync_2617	sync_0150	Nucleotidyl transferase family protein; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.	Identified by match to protein family HMM PF02706.	0.500
cugP	sync_0160	sync_2617	sync_0160	Nucleotidyl transferase family protein; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.966
gmd	cugP	sync_0146	sync_2617	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Nucleotidyl transferase family protein; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.	0.926
gmd	rplD	sync_0146	sync_0436	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.691
gmd	sync_0147	sync_0146	sync_0147	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	0.874
gmd	sync_0148	sync_0146	sync_0148	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Hypothetical protein; Identified by Glimmer2; putative.	0.697
gmd	sync_0150	sync_0146	sync_0150	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Identified by match to protein family HMM PF02706.	0.655
gmd	sync_0160	sync_0146	sync_0160	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.959
gmd	sync_0183	sync_0146	sync_0183	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Undecaprenyl-phosphate glucosephosphotransferase; Identified by match to protein family HMM PF02397.	0.467
gmd	sync_0192	sync_0146	sync_0192	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Putative nucleotide sugar epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.761
gmd	trx-1	sync_0146	sync_0970	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.	0.646
gmd	wcaG-2	sync_0146	sync_0145	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.	0.999
rplD	gmd	sync_0436	sync_0146	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	0.691
rplD	wcaG-2	sync_0436	sync_0145	Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.	0.621
sync_0147	gmd	sync_0147	sync_0146	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.	0.874
sync_0147	sync_0148	sync_0147	sync_0148	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	Hypothetical protein; Identified by Glimmer2; putative.	0.697
sync_0147	sync_0150	sync_0147	sync_0150	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	Identified by match to protein family HMM PF02706.	0.946
sync_0147	sync_0160	sync_0147	sync_0160	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.	0.829
sync_0147	sync_0192	sync_0147	sync_0192	Possible sugar transferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03025.	Putative nucleotide sugar epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.	0.409