STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0154Membrane protein, putative. (435 aa)    
Predicted Functional Partners:
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
 
 0.999
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.994
sync_2424
Cytochrome P450; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
 0.924
sync_1457
Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
 0.895
sync_2656
Isochorismate synthase; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543.
  
  
 0.889
sync_2672
Hypothetical protein; Identified by Glimmer2; putative.
  
 0.871
sync_2507
Possible 4'-phosphopantetheinyl transferase family protein; Identified by match to protein family HMM PF01648; Belongs to the P-Pant transferase superfamily.
  
 
 0.863
fcs
feruloyl-CoA synthetase; Identified by similarity to GB:CAC18323.1; match to protein family HMM PF00501; match to protein family HMM TIGR01923.
  
 0.855
fadD-2
long-chain-fatty-acid-CoA ligase.
  
 0.855
sync_2653
Putative O-succinylbenzoate--CoA ligase; Identified by match to protein family HMM TIGR01923.
  
 0.855
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (30%) [HD]