Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mviN-1Integral membrane protein MviN; Identified by match to protein family HMM PF03023. (497 aa)    
Predicted Functional Partners:
sync_0169
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350.
  
    0.782
neuA-1
CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348.
  
    0.778
mviN-2
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
  
     0.677
sync_0175
Hypothetical protein; Identified by Glimmer2; putative; Belongs to the HpcH/HpaI aldolase family.
       0.659
sync_0174
N-acetylneuraminic acid condensing enzyme; Identified by match to protein family HMM PF01354; match to protein family HMM PF03102.
       0.647
sync_0173
Pilin glycosylation protein PglB NMB1820.
     
 0.643
hisH-1
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.642
sync_0176
Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.642
sync_0177
Conserved hypothetical protein.
       0.642
asnB
Asparagine synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536.
       0.512
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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