Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hisH-1 | neuA-1 | sync_0172 | sync_0170 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | 0.656 |
| hisH-1 | neuA-2 | sync_0172 | sync_0182 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Posttranslational flagellin modification protein B; Identified by match to protein family HMM PF02348. | 0.469 |
| hisH-1 | sync_0169 | sync_0172 | sync_0169 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350. | 0.714 |
| hisH-1 | sync_0173 | sync_0172 | sync_0173 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Pilin glycosylation protein PglB NMB1820. | 0.773 |
| hisH-1 | sync_0174 | sync_0172 | sync_0174 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | N-acetylneuraminic acid condensing enzyme; Identified by match to protein family HMM PF01354; match to protein family HMM PF03102. | 0.779 |
| hisH-1 | sync_0175 | sync_0172 | sync_0175 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Hypothetical protein; Identified by Glimmer2; putative; Belongs to the HpcH/HpaI aldolase family. | 0.773 |
| hisH-1 | sync_0176 | sync_0172 | sync_0176 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.999 |
| hisH-1 | sync_0177 | sync_0172 | sync_0177 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Conserved hypothetical protein. | 0.975 |
| hisH-1 | sync_0179 | sync_0172 | sync_0179 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Identified by match to protein family HMM PF00571; match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.620 |
| hisH-1 | sync_0185 | sync_0172 | sync_0185 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | Conserved hypothetical protein. | 0.475 |
| neuA-1 | hisH-1 | sync_0170 | sync_0172 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.656 |
| neuA-1 | neuA-2 | sync_0170 | sync_0182 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Posttranslational flagellin modification protein B; Identified by match to protein family HMM PF02348. | 0.536 |
| neuA-1 | sync_0169 | sync_0170 | sync_0169 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350. | 0.960 |
| neuA-1 | sync_0173 | sync_0170 | sync_0173 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Pilin glycosylation protein PglB NMB1820. | 0.710 |
| neuA-1 | sync_0174 | sync_0170 | sync_0174 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | N-acetylneuraminic acid condensing enzyme; Identified by match to protein family HMM PF01354; match to protein family HMM PF03102. | 0.972 |
| neuA-1 | sync_0175 | sync_0170 | sync_0175 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Hypothetical protein; Identified by Glimmer2; putative; Belongs to the HpcH/HpaI aldolase family. | 0.658 |
| neuA-1 | sync_0176 | sync_0170 | sync_0176 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.648 |
| neuA-1 | sync_0177 | sync_0170 | sync_0177 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Conserved hypothetical protein. | 0.863 |
| neuA-1 | sync_0179 | sync_0170 | sync_0179 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Identified by match to protein family HMM PF00571; match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family. | 0.594 |
| neuA-1 | sync_0185 | sync_0170 | sync_0185 | CMP-N-acetylneuraminic acid synthetase; Identified by match to protein family HMM PF02348. | Conserved hypothetical protein. | 0.673 |
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