Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rpiA | sync_0156 | sync_2363 | sync_0156 | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.402 |
rpiA | sync_0209 | sync_2363 | sync_0209 | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | 0.442 |
sync_0156 | rpiA | sync_0156 | sync_2363 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.402 |
sync_0156 | sync_0208 | sync_0156 | sync_0208 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.949 |
sync_0156 | sync_0209 | sync_0156 | sync_0209 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | 0.470 |
sync_0207 | sync_0208 | sync_0207 | sync_0208 | Hypothetical protein. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.563 |
sync_0207 | sync_0209 | sync_0207 | sync_0209 | Hypothetical protein. | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | 0.444 |
sync_0208 | sync_0156 | sync_0208 | sync_0156 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.949 |
sync_0208 | sync_0207 | sync_0208 | sync_0207 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | Hypothetical protein. | 0.563 |
sync_0208 | sync_0209 | sync_0208 | sync_0209 | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | 0.644 |
sync_0209 | rpiA | sync_0209 | sync_2363 | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.442 |
sync_0209 | sync_0156 | sync_0209 | sync_0156 | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.470 |
sync_0209 | sync_0207 | sync_0209 | sync_0207 | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | Hypothetical protein. | 0.444 |
sync_0209 | sync_0208 | sync_0209 | sync_0208 | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.644 |
sync_0209 | sync_1364 | sync_0209 | sync_1364 | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | 0.412 |
sync_1364 | sync_0209 | sync_1364 | sync_0209 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | Aldose 1-epimerase subfamily protein; Identified by match to protein family HMM PF01263. | 0.412 |