STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0219ATP-binding ABC transporter family protein; Identified by match to protein family HMM PF00005. (559 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.893
sync_1208
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
  
0.675
sync_1939
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
  
0.668
sync_1638
Heavy metal ABC transporter (HMT) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
  
0.667
sync_1046
ABC transporter, multidrug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
  
0.663
sync_0223
Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.
  
  
 0.649
sync_0220
Possible glycosyltransferase family 1; Identified by match to protein family HMM PF00534.
       0.636
sync_0221
Possible glycosyltransferase group 1; Identified by match to protein family HMM PF00534.
       0.613
sync_0222
Identified by similarity to SP:Q9R9N1; match to protein family HMM PF00534.
       0.613
sync_0218
Hypothetical protein; Identified by Glimmer2; putative.
       0.576
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.