Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sync_0219ATP-binding ABC transporter family protein; Identified by match to protein family HMM PF00005. (559 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.893
sync_0223
Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.
  
  
 0.644
sync_0220
Possible glycosyltransferase family 1; Identified by match to protein family HMM PF00534.
       0.639
sync_0221
Possible glycosyltransferase group 1; Identified by match to protein family HMM PF00534.
       0.613
sync_0222
Identified by similarity to SP:Q9R9N1; match to protein family HMM PF00534.
       0.613
sync_0218
Hypothetical protein; Identified by Glimmer2; putative.
       0.576
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
   
 0.507
sync_0217
Conserved hypothetical protein.
       0.506
sync_0216
Heme oxygenase; Identified by match to protein family HMM PF01126.
       0.505
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
  
     0.485
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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