STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0235Conserved hypothetical protein. (150 aa)    
Predicted Functional Partners:
sync_1205
Conserved hypothetical protein.
  
     0.634
sync_0256
Conserved hypothetical protein.
  
     0.626
sync_0155
Conserved hypothetical protein.
  
     0.622
sync_1509
Conserved hypothetical protein.
  
     0.551
sync_0478
Conserved hypothetical protein.
  
     0.530
sync_0369
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
  
     0.529
sync_1496
Thioredoxin-like protein.
  
     0.492
sync_2053
Uncharacterized protein.
  
     0.472
sync_2781
Rubredoxin; Identified by match to protein family HMM PF00301; match to protein family HMM PF02915.
  
     0.461
sync_1176
Conserved hypothetical protein; Identified by match to protein family HMM PF01636.
  
     0.448
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.