STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0259Conserved hypothetical protein. (299 aa)    
Predicted Functional Partners:
sync_0258
Enoyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
       0.773
hisB
Imidazoleglycerol-phosphate dehydratase; Identified by match to protein family HMM PF00475.
       0.603
sync_0256
Conserved hypothetical protein.
       0.541
sync_0257
Blue light photoreceptor cryptochrome.
       0.541
sync_0261
Retinal pigment epithelial membrane protein; Identified by match to protein family HMM PF03055.
       0.476
sync_2689
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.434
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.