STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rffMGlycosyl transferase WecB/TagA/CpsF family protein; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family. (303 aa)    
Predicted Functional Partners:
sync_1406
Conserved hypothetical protein.
   
 0.881
sync_0183
Undecaprenyl-phosphate glucosephosphotransferase; Identified by match to protein family HMM PF02397.
    
 0.819
sync_0723
Galactosyl-1-phosphate transferase; Identified by match to protein family HMM PF02397.
    
 0.787
sync_0301
Glycosyl transferase, group 4 family protein; Identified by match to protein family HMM PF00953.
 
 
 
 0.735
sync_1013
Possible LytR-membrane bound transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
   
 0.617
sync_1044
Putative cell envelope-related function transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
   
 0.593
sync_0281
Phosphorylase kinase alpha chain; Identified by match to protein family HMM PF05682.
       0.583
sync_2159
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
   
 0.581
sync_0223
Glycosyl transferase, group 1; Identified by match to protein family HMM PF00534.
  
 
 0.505
sync_0150
Identified by match to protein family HMM PF02706.
     
 0.498
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.