STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0286Two-component sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. (339 aa)    
Predicted Functional Partners:
sync_2642
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
  
 
 
 0.794
sync_0115
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.786
sync_2597
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.778
sync_2591
DNA-binding response regulator RpaA; Identified by similarity to GB:AAD30120.2; match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.775
sync_1079
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 0.768
sync_1145
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.757
sync_2111
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.749
sync_1133
Histidine protein kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
 
 
 0.742
sync_0669
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
   0.741
sync_1134
Response regulator receiver domain; Identified by match to protein family HMM PF00072.
 
 
 
 0.740
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.