Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
sync_0291 | sync_0392 | Conserved hypothetical protein. | Proline-rich region. | 0.773 |
sync_0291 | sync_0563 | Conserved hypothetical protein. | Uncharacterized protein. | 0.774 |
sync_0291 | sync_0757 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.767 |
sync_0291 | sync_1143 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE07418.1. | 0.770 |
sync_0291 | sync_1287 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
sync_0291 | sync_1639 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE20668.1. | 0.765 |
sync_0291 | sync_1957 | Conserved hypothetical protein. | CO2 hydration protein; Identified by match to protein family HMM TIGR01964. | 0.764 |
sync_0291 | sync_2015 | Conserved hypothetical protein. | Uncharacterized membrane protein. | 0.762 |
sync_0291 | sync_2192 | Conserved hypothetical protein. | Metallo-beta-lactamase superfamily hydrolase. | 0.766 |
sync_0291 | sync_2274 | Conserved hypothetical protein. | Ferredoxin-thioredoxin reductase variable chain. | 0.763 |
sync_0392 | sync_0291 | Proline-rich region. | Conserved hypothetical protein. | 0.773 |
sync_0392 | sync_0563 | Proline-rich region. | Uncharacterized protein. | 0.774 |
sync_0392 | sync_0757 | Proline-rich region. | Conserved hypothetical protein. | 0.744 |
sync_0392 | sync_1143 | Proline-rich region. | Conserved hypothetical protein; Identified by similarity to GB:CAE07418.1. | 0.751 |
sync_0392 | sync_1287 | Proline-rich region. | Conserved hypothetical protein. | 0.774 |
sync_0392 | sync_1639 | Proline-rich region. | Conserved hypothetical protein; Identified by similarity to GB:CAE20668.1. | 0.726 |
sync_0392 | sync_1957 | Proline-rich region. | CO2 hydration protein; Identified by match to protein family HMM TIGR01964. | 0.709 |
sync_0392 | sync_2015 | Proline-rich region. | Uncharacterized membrane protein. | 0.773 |
sync_0392 | sync_2192 | Proline-rich region. | Metallo-beta-lactamase superfamily hydrolase. | 0.666 |
sync_0392 | sync_2274 | Proline-rich region. | Ferredoxin-thioredoxin reductase variable chain. | 0.761 |
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