STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0297Conserved hypothetical protein. (96 aa)    
Predicted Functional Partners:
sync_0298
Uncharacterized membrane protein.
 
     0.877
sync_0296
Possible Cytochrome c oxidase subunit Va.
       0.784
sync_2053
Uncharacterized protein.
  
     0.760
sync_2015
Uncharacterized membrane protein.
  
     0.738
sync_1227
Conserved hypothetical protein; Identified by similarity to GB:CAE20984.1.
  
     0.737
sync_1721
CheY-like domain containing protein.
  
     0.731
sync_2026
Single-stranded DNA-binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
  
     0.719
sync_2198
Uncharacterized protein.
  
     0.700
sync_2646
Unnamed protein product.
  
     0.699
sync_2544
Putative membrane protein; Identified by similarity to GB:CAE20354.1.
  
     0.698
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.