Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
sync_0360 | sync_0361 | Possible Vng0271c. | Glycosidase; Identified by match to protein family HMM PF00128. | 0.968 |
sync_0360 | sync_0362 | Possible Vng0271c. | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | 0.953 |
sync_0360 | sync_0363 | Possible Vng0271c. | Predicted redox protein; Identified by match to protein family HMM PF02566. | 0.412 |
sync_0361 | sync_0360 | Glycosidase; Identified by match to protein family HMM PF00128. | Possible Vng0271c. | 0.968 |
sync_0361 | sync_0362 | Glycosidase; Identified by match to protein family HMM PF00128. | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | 0.952 |
sync_0361 | sync_0363 | Glycosidase; Identified by match to protein family HMM PF00128. | Predicted redox protein; Identified by match to protein family HMM PF02566. | 0.539 |
sync_0362 | sync_0360 | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | Possible Vng0271c. | 0.953 |
sync_0362 | sync_0361 | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | Glycosidase; Identified by match to protein family HMM PF00128. | 0.952 |
sync_0362 | sync_0363 | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | Predicted redox protein; Identified by match to protein family HMM PF02566. | 0.539 |
sync_0363 | sync_0360 | Predicted redox protein; Identified by match to protein family HMM PF02566. | Possible Vng0271c. | 0.412 |
sync_0363 | sync_0361 | Predicted redox protein; Identified by match to protein family HMM PF02566. | Glycosidase; Identified by match to protein family HMM PF00128. | 0.539 |
sync_0363 | sync_0362 | Predicted redox protein; Identified by match to protein family HMM PF02566. | Mannosyl-3-phosphoglycerate phosphatase homolog; Identified by match to protein family HMM TIGR01484; match to protein family HMM TIGR01486; match to protein family HMM TIGR02461. | 0.539 |